Basecamp says that BaseFold builds on that model, which predicts the 3D structure of a protein based on its amino acid sequence, by layering in a foundational dataset (BaseGraph) that considers ...

protConv provides a workflow for predicting the C-alpha backbone of polypeptides from their primary amino acid sequence using a 1D Convolutional Neural Network (CNN). The project leverages curated ...

School of Molecular Sciences, Arizona State University, Tempe, Arizona 85281, United States The Biodesign Institute Center for Personalized Diagnostics, Arizona State University, Tempe, Arizona 85281, ...

Where protein binding causes a departure from the structure and/or dynamics of the protein-free DNA, this makes a thermodynamically unfavorable contribution to protein–DNA interaction, which must be ...

Protein language models (PLMs) pretrained via a masked language modeling objective have proven effective across a range of structure-related tasks, including high-resolution structure prediction.

State Key Laboratory of Agricultural Products Safety, Key Laboratory of Biotechnology in Plant Protection of MARA, Zhejiang Key Laboratory of Green Plant Protection, Institute of Plant Virology, ...